2014-12-02 Tuesday Team Meeting
Dundee: Kenny, Mark, Petr, Jean-Marie, June, Will, Balaji, Dominik, Helen, Andrew, Simon, Roger, Gus (14:41) Remote: Colin, Chris, Josh M, Kelli, Mark H, Sebastien B, Melissa, Josh B, Douglas, Simone, Sebastien S, Yuriy
Agenda - 2:30pm Start
Accepting minutes from last meeting
- accepted
Project Status (15 minutes max)
Mainline (5 minutes) - 14:30 UK
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5.1.0 (m3)
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Mark: graph traversal reimplementation PR now open
- improves performance, fixes various integration tests
- room for further performance improvement outwith the graph traversal
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Units - Trello board with the status.
- Jean-Marie: Will working on web, factory on Python front
- Josh: some awkward Ice 3.4/3.5 issues
- Jean-Marie: continue post-standup meetings
- Maps - Handing off to client devs (merging likely tomorrow with few outstanding issues)
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Rendering - Schema in progress, Andrew working on it in discussion with Jean-Marie.
- tradeoff between XML representation and usability in code
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libometiff (Roger)
- about halfway, some PRs open
- OME-XML metadata glue should be done later this week, OME-TIFF reader and writer to follow
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Jean-Marie: jsTree blocked by Hibernate
- Josh: will take a look after ordered maps are in, trying to unblock people waiting for model changes
- Jean-Marie: review will be a significant effort
- documentation: still plenty to do
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Mark: graph traversal reimplementation PR now open
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5.1.0 (m3)
Glencoe Update (5 minutes) (Chris) - 14:37 UK
- will open PRs once Emil is back tomorrow
Consortium Update (5 minutes) - 14:37 UK
- Sebastien B: U-Track released, will be working on OME-TIFF generation
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Simone: Bio-Formats and Hadoop, working on Avro serialization/deserialization
- adding code to GitHub repository, proof-of-concept application
- working toward feature analysis with WND-CHARM
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Yuriy: now have working application for OPT from OMERO
- reconstructs volumetric data
- downsampling for quick viewing
- can use GPU for much faster processing
AOB (5 mins max - technical discussions should be highlighted to relevant people and rescheduled) - 14:42 UK
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Meetings update - recently attended and upcoming
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Jean-Marie: in Glasgow last week (Scottish microscopy event)
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group in St Andrew’s building light-sheet microscope
- discarding black pixels to reduce file size
- plenty of EM image users (Aberdeen, etc.)
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group in St Andrew’s building light-sheet microscope
- Simon going to biodata visualization meeting
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Dominik: developer meeting in Dundee
- some talks could be relevant to new client implementation
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Jean-Marie: in Glasgow last week (Scottish microscopy event)
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BF/docs standups
- default to 2pm daily, can adjust and keep them short to fit around other meetings
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Meetings update - recently attended and upcoming
Done 14:51 UK