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You are here: Home Community Minutes Conference Calls 2014 2014-12-02 Tuesday Team Meeting

2014-12-02 Tuesday Team Meeting

Dundee: Kenny, Mark, Petr, Jean-Marie, June, Will, Balaji, Dominik, Helen, Andrew, Simon, Roger, Gus (14:41) Remote: Colin, Chris, Josh M, Kelli, Mark H, Sebastien B, Melissa, Josh B, Douglas, Simone, Sebastien S, Yuriy

Agenda - 2:30pm Start

  1. Accepting minutes from last meeting

    • accepted
  2. Project Status (15 minutes max)

    1. Mainline (5 minutes) - 14:30 UK

      • 5.1.0 (m3)
        • Mark: graph traversal reimplementation PR now open
          • improves performance, fixes various integration tests
          • room for further performance improvement outwith the graph traversal
        • Units - Trello board with the status.
          • Jean-Marie: Will working on web, factory on Python front
          • Josh: some awkward Ice 3.4/3.5 issues
          • Jean-Marie: continue post-standup meetings
        • Maps - Handing off to client devs (merging likely tomorrow with few outstanding issues)
        • Rendering - Schema in progress, Andrew working on it in discussion with Jean-Marie.
          • tradeoff between XML representation and usability in code
        • libometiff (Roger)
          • about halfway, some PRs open
          • OME-XML metadata glue should be done later this week, OME-TIFF reader and writer to follow
        • Jean-Marie: jsTree blocked by Hibernate
          • Josh: will take a look after ordered maps are in, trying to unblock people waiting for model changes
          • Jean-Marie: review will be a significant effort
        • documentation: still plenty to do
    2. Glencoe Update (5 minutes) (Chris) - 14:37 UK

      • will open PRs once Emil is back tomorrow
    3. Consortium Update (5 minutes) - 14:37 UK

      • Sebastien B: U-Track released, will be working on OME-TIFF generation
      • Simone: Bio-Formats and Hadoop, working on Avro serialization/deserialization
        • adding code to GitHub repository, proof-of-concept application
        • working toward feature analysis with WND-CHARM
      • Yuriy: now have working application for OPT from OMERO
        • reconstructs volumetric data
        • downsampling for quick viewing
        • can use GPU for much faster processing
  3. AOB (5 mins max - technical discussions should be highlighted to relevant people and rescheduled) - 14:42 UK

    • Meetings update - recently attended and upcoming
      • Jean-Marie: in Glasgow last week (Scottish microscopy event)
        • group in St Andrew’s building light-sheet microscope
          • discarding black pixels to reduce file size
        • plenty of EM image users (Aberdeen, etc.)
      • Simon going to biodata visualization meeting
      • Dominik: developer meeting in Dundee
        • some talks could be relevant to new client implementation
    • BF/docs standups
      • default to 2pm daily, can adjust and keep them short to fit around other meetings

Done 14:51 UK

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