- Info
2012 OME User's Meeting - Programme
A programme of talks on day 1, followed by workshops on day 2.
Day 1 — Monday 18th June, 2012
08:30 - 09:00 |
Registration & Coffee |
09:00 - 09:10 |
Welcome & Introduction |
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Spencer Shorte, Institut Pasteur & Jason Swedlow, OME Dundee |
09:10 - 09:35 |
OME in Dundee |
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Emma Hill, Dundee |
09:35 - 10:00 |
OMERO: Down Under |
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Kim Linton, Monash University |
10:00 - 10:25 |
Inspiring application of OMERO – a case study |
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Steve Rawsthorne, John Innes Centre |
10:25 - 10:50 |
Columbus for HCS and Secondary Analysis |
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Martin Daffertshofer, PerkinElmer |
10:50 - 11:20 |
Coffee |
11:20 - 11:45 |
The JCB DataViewer: Bringing New Dimensions to Published Image Data |
— |
Liz Williams, JCB |
11:45 - 12:10 |
ImageJ2 – ImageJ for the Next Generation of Biological Image Data |
— |
Kevin Eliceiri, Univ Wisconsin-Madison |
12:10 - 12:35 |
Using OMERO for yeast high throughput microscopy: from images to networks |
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Anatole Chessel, Gurdon Institute, Univ of Cambridge |
12:35 - 12:45 |
Group Picture Time |
12:45 - 14:00 |
Lunch |
14:00 - 14:15 |
Satellite Overview |
— |
Jason Swedlow, OME Dundee |
14:15 - 14:40 |
What Can Woolz Bring To OME? |
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Bill Hill, MRC-HGU |
14:40 - 15:05 |
CellOrganizer, PatternUnmixer and OMERO |
— |
Bob Murphy, Carnegie Mellon University |
15:05 - 15:30 |
Icy–An Open-Source Community Image Processing Software |
— |
Jean-Christophe Olivo-Marin, Institut Pasteur |
15:30 - 16:00 |
Coffee |
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16:00 - 17:30 |
Josh’s Annual Polling Priorities and Wishes |
— |
Josh Moore, OME & Glencoe Software |
17:30 - 19:30 |
Poster Session with Wine & Nibbles |
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Day 2 — Tuesday 19th June, 2012
08:30 - 09:00 |
Coffee |
09:00 - 09:15 |
Introduction |
09:15 - 10:45 |
Workshop I |
* Implementing OMERO
* Integrating with Insight
* Extending OMERO.web
* Integrating Bio-Formats
* OMERO Usability & User feedback
10:45 - 11:15 |
Coffee |
11:15 - 12:45 |
Workshop II |
* Integrating with Insight
* Integrating Bio-Formats
* Writing scripts
* OMERO Usability & User feedback
12:45 - 14:00 |
Lunch |
14:00 - 15:30 |
Workshop III |
* Extending OMERO.web
* Integrating Bio-Formats
* Integrating OME and ImageJ into KNIME for high-throughput image analysis
* OMERO Usability & User feedback
15:30 - 16:00 |
Coffee |
16:00 - 17:00 |
Feedback & Wrap-Up |
Please email us before the meeting if there is another workshop that you would like us to run.