2017-02-14 Tuesday Team Meeting
Dundee: Kenny, Petr, Ola, Balaji, Mark, JM, Helen, Simon, Roger, June, Simone, Jason, Remote: Sebastien, Eleanor, Wilma, Will, Melissa, David, Emil, Chris, Andreas
Agenda - 2:00pm Start
Accepting minutes from last meeting
Project Timelines (2-3 minutes each)
Spaces
Files/Formats/OME Files (Sebastien)
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OME Files 0.3.0
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Seb: Just out the door.
- Next steps: start using/consuming this, benchmarking for paper revision.
- C++ implementation way better than Jace for real/large data
- Couple of fixes to come
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Seb: Just out the door.
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Bio-Formats 5.3.4
- Just integrated PR fixing regression
- Early next week for release planned, then moving on patch releases
- Discussions to come re: tidying, Big-images and tiling
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OME Files 0.3.0
Metadata (Eleanor)
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IDR demo33 release - annotation fixes
- fixing annotation bugs mainly (changing annotations for mapr, update, delete)
- Paper reviews back
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Next IDR release - more datasets, new Embassy cloud set up
- Waiting to hear back from EBI - setup ongoing
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Plans for more analysis - genes related to proteasome (~30 genes) - analysis of existing phenotypes and looking at features from images related to these genes.
- Jason: Trying to exercise the datasets in the IDR
- Simon: Sysadmin docs for IDR being written, linked from paper
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IDR demo33 release - annotation fixes
OMERO 5.3.0 (J-M)
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5.3.0-m8 available
- out today, to test release workflow (pdfs etc)
- web API change (support for well)
- Bio-Formats 5.3.3 (not 5.3.4) -
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doc work ongoing
- can people look at unattached cards and join cards if they can
- ice 3.6 will be default, so docs to clean/update ice 3.5 references
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New Roles (Mark)
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preventing privilege elevation in user management turning out to be difficult
- made progress but will probably take this week too to get that working
- Will started work on webadmin side
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Will has created new UI, PR open (light-admins)
- Helen: Can we document it now?
- Mark: Probably, though perhaps not screenshots.
- Petr: ppt and card explains all the permissions
- JM: same for change ownership
- Balaji has created some videos for import and import-as from the CLI, will be useful for facility managers. To be published.
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preventing privilege elevation in user management turning out to be difficult
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5.3.0-m8 available
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- Josh at neubias (Lisbon)
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ELMI coming up. Workshop? (Dubrovnik) 23-26 May
- Petr: Last meeting was useful - lots of interest
- Seb: Overlap with user meeting (31 May-01 June)
- (Cambridge workshops end of June)
Other releases/upgrades:
- Figure
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Iviewer
- Some PRs open, ROI workflows improving, daily cowfish deployments
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Sysadmin
- SLS infra issues
Glencoe Update (Chris)
- Big focus at the moment are RO and scalability issues
- PathViewer bugfix releases
#POTN
Users Meeting (Jason)-
Workshops: expect same format.
- Lightning talks (morning), Invited (afternoon)
- Thoughts appreciated on format of workshops
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Workshops: expect same format.
AOB (5 mins max - technical discussions should be highlighted to relevant people and rescheduled)