Bio-Formats

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Using Bio-Formats with ImageJ and Fiji

The following sections explain the features of Bio-Formats and how to use it within ImageJ and Fiji:

OMERO

OMERO 5 uses Bio-Formats to read original files from over 140 file formats. Please refer to the OMERO documentation for further information.


Many other software packages can use Bio-Formats to read and write microscopy formats (click on the package for further details):

Image server applications

Libraries and scripting applications

Numerical data processing applications