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OME-XML Major Version Release

12 July 2010 - An update to the OME Data Model

The Open Microscopy Environment is pleased to announce a major update to the OME-XML schema files. These files provide the authoritative description of the OME Data Model.

This June 2010 release is a major (breaking) version that is NOT backwardly compatible with files created for the April 2010 release.

As this is a major release it makes use of a new namespace:

http://www.openmicroscopy.org/Schemas/OME/2010-06/

Full details of the changes made can be found at:

http://www.ome-xml.org/milestone/June-2010-Schema-Release

Key changes made with this release include:

  • Release brought in step with release of OMERO 4.2
  • Introduction of more restrictive integer type.
  • Fixing issue with Well Sample Timepoint. NOTE: timepoints were not being filled out by any formats and so any values filled by 3rd parties will be lost in the upgrade.
  • Adding Width and Height to ROI Mask.
  • Reworking annotations to add new types (Term and Tag) and allow cross-linking all annotations.

An XSLT transform from April 2010 to June 2010 is available here:

http://trac.openmicroscopy.org.uk/ome/browser/ome.git/components/specification/Xslt

Sample OME-XML and OME-TIFF files are available here:

http://trac.openmicroscopy.org.uk/ome/browser/ome.git/components/specification/Samples/OmeFiles/2010-06/

Thank you to everyone who provided input on these changes. We welcome your suggestions for further improvements. Comments can be emailed to us or added as tickets at: http://www.ome-xml.org/

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