2016-03-22 Tuesday Team Meeting
Dundee: Dominik, Kenny, Mark C, Petr, Jean-Marie, Will, Helen, Ola, Roger, June, Balaji, Simon, Simone, Stick, Liza Remote: Colin, Sebastien B, Gus, Ian, Kelli, Josh M, Andreas, David, Melissa, Eleanor, Emil
Agenda - 2:00pm Start
Accepting minutes from last meeting
- accepted
Project Timelines (2-3 minutes each)
Spaces - 14:00 UK
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Mainline (J-m)
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dropped Windows server/web support for 5.3 due to testing burden
- Helen: announced on ome-users list and forum, will be updating documentation
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working on docker/CI infrastructure for Ice 3.6, Java 1.9
- increasing integration of automated scripts with sysadmin documentation
- Will: improving tagging in web
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Colin: Ice 3.6 revealed integration test issues
- puzzling, somewhat reproducible, lacking useful Ice logging
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Simon: where is this running?
- Colin: running tests against docker image from J-M
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dropped Windows server/web support for 5.3 due to testing burden
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Model (Sebastien)
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Mark: PRs merged
- further Shape model property changes
- Blitz API Folder recursive queries
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Mark: assisting with generating test data
- revealed that Insight measurement tool currently has scaling issues
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will tag intermediate milestone today for C++ release next week
- Josh: OME-Files release end-of-month deadline
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Mark: PRs merged
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Metadata (Josh)
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See wnd-charm & openstack columns from the IDR board
- concept of "mini IDR" with representative sample of full data, useful for testing
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Data loading starting in about a month, which will require new metadata definition.
- maybe five or six studies, not all are HCS
- Eleanor: working on small study now, awaiting arrival of several non-HCS datasets
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HCS tickets from the metadata board (starting with the search URL)
- Will and Ola are helping out with these
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Jean-Marie: when might extra testers be needed?
- Josh M: maybe late April, early May
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See wnd-charm & openstack columns from the IDR board
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Mainline (J-m)
Other releases/upgrades - 14:09 UK
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Figure
- Will: probably enough now to justify a release when convenient
- Jean-Marie: good to avoid capping of pillow in mainline
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FLIMfit/OPT (Ian)
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commercial software update is generating invalid OME-TIFF
- not sure how to start conversation with vendor on this problem
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Jean-Marie: got sample files?
- Ian: in abundance
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commercial software update is generating invalid OME-TIFF
- ImageJ
- Learning
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Sysadmin (Kenny)
- plenty of patching and rebooting lately, thank you for patience
- will move focus on to AWstats
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FLOSSUK very useful
- Simon: notes on Trello
- money spent? Yes.
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Figure
Glencoe Update (Chris) - 14:13 UK
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Emil: good web API meeting today
- Jean-Marie: regular occurrence henceforth, probably mostly on backend rather than mockups
- Jean-Marie: some Glencoe work will come back to mainline
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Emil: good web API meeting today
AOB (5 mins max - technical discussions should be highlighted to relevant people and rescheduled) - 14:16 UK
- June: finalizing users' meeting registration process, will soon have OME team register
- T-shirts for the users' meeting - design ideas to June by Monday 28th March please
ROI/Model next steps - Sebastien - 14:19 UK
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Jean-Marie: where to put large data for performance testing?
- Sebastien: have been starting to ramp up on this, to some extent can use our servers, but will probably need dedicated server with real data at some point
- Josh M: new IDR hardware should be fast (to spin up clones)
- Jean-Marie: main concern is infrastructure capacity being a blocker on the timeline
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Jean-Marie: do we yet have metrics for, e.g., importing large plates with ROIs?
- Mark C: no
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Jean-Marie: is import/export loop handled in IDR?
- Josh M: no, current proposal is to make export of folders, ROIs, etc., separate processes
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Emil: put FileAnnotations in folders?
- Sebastien: not yet, but Annotation is on the shortlist (Josh: would add OriginalFile to the initial medium list)
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Jean-Marie: where to put large data for performance testing?
Done 14:40 UK