2016-03-01 Tuesday Team Meeting
Dundee: Kenny, Petr, Colin, Mark C, Gus, Simon, Jean-Marie, Balaji, June, Will, Ola, Jason Remote: Ian, Andreas, Kelli, David, Eleanor, Wilma, Melissa, Emil
Agenda - 2:30pm Start
Accepting minutes from last meeting
- accepted
Project Timelines (2-3 minutes each)
Spaces - 14:30 UK
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Mainline (J-m)
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Release out.
- put the help live, followup PR for tiny changes
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5.2.3 Trello board now created, finalizing cards this week to be included
- still to decide about Ice 3.6, etc.
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balance between infrastructure, UI, etc.
- Jason: need enough that is visible to and benefits end users
- Prep items for next release. Few things to be discussed this week, date to be finalised.
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Release out.
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Model (Sebastien)
- documentation now staged
- ready to move forward with ROI changes after latest comment period, see nitpick
- Jean-Marie: anything arising from discussion from last week’s m1 demo? Any issues requiring prompt resolution?
- Kelli: edited m1 demo soon onto YouTube
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Metadata
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Status from Simon (openstack on orcas) & Eleanor
- Eleanor: working more on large study from the Broad Institute, tacking some issues
- Eleanor: getting terms into ontologies
- Eleanor: more work on non-screen high-content datasets
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Simon: working on OpenStack installation (alternative to VMware)
- will use it for some IDR work
- moving IDR OMERO into it now may ease eventual transition into EBI cloud
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Ola: jsTree work
- Eleanor: interested to see
- Josh/Simone: OME-Files concept being discussed at the CMSO in Ghent. Follow-up chats Friday or early next week.
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Status from Simon (openstack on orcas) & Eleanor
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Mainline (J-m)
Other releases/upgrades - 14:41 UK
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Figure
- Will: will be included in demo to Tomo lab
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FLIMfit/OPT (Ian)
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FLIMfit - 4.10.3 released
- N.B. https://github.com/imperial-photonics/FLIMfit/issues/182
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Hope to have a 5.2 version ready for testing this week.
- Jean-Marie: so some testing needed?
- Ian: probably early next week, will talk to Petr
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Ian: Curtis will take a look at the UI for FLIMfit / localization
- Jean-Marie: will probably move GH repository out from Josh’s fork
- Ian: localization talk went okay, was late on Friday
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FLIMfit - 4.10.3 released
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ImageJ
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Balaji: resurrected minimal client to allow MicroManager / ImageJ / OMERO bridge without running short of memory, used gateway to create prototype
- uses Ian’s SPW work
- hoping to serve as example codebase
- Jean-Marie: creating repos to move work into, e.g., with UI consuming Blitz
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Balaji: resurrected minimal client to allow MicroManager / ImageJ / OMERO bridge without running short of memory, used gateway to create prototype
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Learning
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Ola: presented VM to Paul’s visitor from medical institute in India
- enthusiastic, just need to buy a scanner
- Gus: will also include radiology
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Ola: presented VM to Paul’s visitor from medical institute in India
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Sysadmin
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Kenny: many systems patched last week, caused Trac/forums e-mail issues, now fixed and working on another issue
- thanks to those who helped, and to the team for their patience
- also demo server now upgraded to 5.2.2
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Ola: don’t upgrade learning automatically with each release
- Kenny: should remove card from template
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Kenny: many systems patched last week, caused Trac/forums e-mail issues, now fixed and working on another issue
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Figure
Glencoe Update (Emil) - 14:55 UK
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work on web, viewer configuration, marshalling, etc.
- Jean-Marie: now merged
- discussion with JB and Mark went well, regarding Oracle issues
- work on populate metadata script to identify data types for it
- Jean-Marie: coming web viewer discussion, probably morning to include Harald
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work on web, viewer configuration, marshalling, etc.
AOB (5 mins max - technical discussions should be highlighted to relevant people and rescheduled) - 14:57 UK
- Jason: huge thank you for letters of support
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Colin: poster accepted for SPIE astronomy conference in Edinburgh at the end of June / start of July
- Gus: happy to help with poster
- June: now focusing on user meeting
Done 14:58 UK