2009-11-12 Thursday Meeting
Notes
Admin
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Jason at Wellcome Trust
- "if this picks up, current funds are inadequate"
- waiting on written response
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ASCB
- waiting for article
-
bioformats
- licensing
-
ndim
- email from Curtis
- getting the timing write with the rest of the software community (ImageJ, ...)
- our experiences with SPW, doing things slowly and right, and the half-way houses
- several uses cases, real data.
- will keep thinking about it.
- keeping legacy API in place
-
Jason at Wellcome Trust
Diagram (starting on the right)
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roi docs
- Chris will be making some changes
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Donald also has some changes to make
- Unspecified polylines/points
- push to next week and add these guys
- NDIM: moving forward
-
ASCB artwork:
- rock theme, team in black kind of cool
-
4.1 bug fixing
- 4.1.1 release
- nominally by end of tomorrow (mergings done)
- Friday/Monday was spent cleaning up some RE mess from release
- also fixes channel concurrency issues
- insertions of HCS data has been reworked (collapsing settings, logical channels, etc.)
- Brian merged importer changes into 4.1
- importer changes: sending log file, setting logging, cli attachments
- TODO: liff fixes, some minor table fixes
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Web:
- merging of configuration? probably
- should not need to specify web commands
- few bugs from the QA
-
Insight:
- some minor UI/JXTreeTable fixes
- projection panel? trunk only.
-
summary: overlays, hcs performance, logical channel names / colors perf, importer stuff
- 64bit build, projection fix, ...
- other metadata bug fixes
-
codegen / MT
- not much progress. (work on 4.1.1 fixes)
- need to sync the ROI changes
- then can finish the templates and bang away
- diagram: shrink MT, and make other boxes bigger
-
scripts
- ~ 4 scripts are pretty much finished, demoable standalone
- splitview script is hooked up. roi one is coming.
- tidy them up, and move common methods in util.*
- demo next Tuesday
-
overlay masks
- going into the server
- rendering engine infrastructure in place
- binary mask arithmetic is in place
- problems: mask speed
-
server-side rois
- done
- workflow is largely the same
- if you had an XML saved, then you save to server and never touch the file again
- patch/flag to remove the connection tool (RoiRoiLinks)
- should display any ROIs on the server.
- model change: text to all shapes
- db change: point size of polygons, polylines were 255 characters.
- on-the-fly update.
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testing next week? latter part of next week.
- testing performance, workflow, etc...
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QA / web
- move QA to next week
- do a review of UI and testing
- fixing bugs tomorrow
- future of web...
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focus on QA for now? do we need to discuss?
- webclient * update of client UI * have a short meeting to give suggestions * do everything that insight does, etc. * all have conflicting arguments. have to make a decision
-
perms
- "guarantee graph groups" was begun. good progress. needs to keep going.
- evaluate next week if still want to try to integrate into the clients
-
cellprofiler
- add to the graffle
- should specify the version we support
- need to communicate on things
- undocumented struct, a patch broke things
- our model has changed as well
- pytable writer gets pushed
- donald away on the 27th (10 working days left)
-
dropbox
- few bugs
- shutdown fix seems to work
- behavior depending on number and size of files
- passing off directory to creation to sysadmin
- bug fixing for next week
- possible to get it into 4.1.1?
-
roi docs