******************************************************************************* MIASReader ******************************************************************************* This page lists supported metadata fields for the Bio-Formats MIAS format reader. These fields are from the :model_doc:`OME data model <>`. Bio-Formats standardizes each format's original metadata to and from the OME data model so that you can work with a particular piece of metadata (e.g. physical width of the image in microns) in a format-independent way. Of the 475 fields documented in the :doc:`metadata summary table </metadata-summary>`: * The file format itself supports 64 of them (13%). * Of those, Bio-Formats fully or partially converts 64 (100%). Supported fields =============================================================================== These fields are fully supported by the Bio-Formats MIAS format reader: * :schema:`Channel : Color <OME-2015-01/ome_xsd.html#Channel_Color>` * :schema:`Channel : ID <OME-2015-01/ome_xsd.html#Channel_ID>` * :schema:`Channel : Name <OME-2015-01/ome_xsd.html#Channel_Name>` * :schema:`Channel : SamplesPerPixel <OME-2015-01/ome_xsd.html#Channel_SamplesPerPixel>` * :schema:`Ellipse : ID <OME-2015-01/ROI_xsd.html#Shape_ID>` * :schema:`Ellipse : RadiusX <OME-2015-01/ROI_xsd.html#Ellipse_RadiusX>` * :schema:`Ellipse : RadiusY <OME-2015-01/ROI_xsd.html#Ellipse_RadiusY>` * :schema:`Ellipse : Text <OME-2015-01/ROI_xsd.html#Shape_Text>` * :schema:`Ellipse : TheT <OME-2015-01/ROI_xsd.html#Shape_TheT>` * :schema:`Ellipse : TheZ <OME-2015-01/ROI_xsd.html#Shape_TheZ>` * :schema:`Ellipse : X <OME-2015-01/ROI_xsd.html#Ellipse_X>` * :schema:`Ellipse : Y <OME-2015-01/ROI_xsd.html#Ellipse_Y>` * :schema:`Experiment : Description <OME-2015-01/ome_xsd.html#Experiment_Description>` * :schema:`Experiment : ID <OME-2015-01/ome_xsd.html#Experiment_ID>` * :schema:`Experiment : Type <OME-2015-01/ome_xsd.html#Experiment_Type>` * :schema:`Image : AcquisitionDate <OME-2015-01/ome_xsd.html#Image_AcquisitionDate>` * :schema:`Image : ExperimentRef <OME-2015-01/ome_xsd.html#ExperimentRef_ID>` * :schema:`Image : ID <OME-2015-01/ome_xsd.html#Image_ID>` * :schema:`Image : InstrumentRef <OME-2015-01/ome_xsd.html#InstrumentRef_ID>` * :schema:`Image : Name <OME-2015-01/ome_xsd.html#Image_Name>` * :schema:`Image : ROIRef <OME-2015-01/ROI_xsd.html#ROIRef_ID>` * :schema:`Instrument : ID <OME-2015-01/ome_xsd.html#Instrument_ID>` * :schema:`Mask : FillColor <OME-2015-01/ROI_xsd.html#Shape_FillColor>` * :schema:`Mask : Height <OME-2015-01/ROI_xsd.html#Mask_Height>` * :schema:`Mask : ID <OME-2015-01/ROI_xsd.html#Shape_ID>` * :schema:`Mask : StrokeColor <OME-2015-01/ROI_xsd.html#Shape_StrokeColor>` * :schema:`Mask : Width <OME-2015-01/ROI_xsd.html#Mask_Width>` * :schema:`Mask : X <OME-2015-01/ROI_xsd.html#Mask_X>` * :schema:`Mask : Y <OME-2015-01/ROI_xsd.html#Mask_Y>` * :schema:`Objective : ID <OME-2015-01/ome_xsd.html#Objective_ID>` * :schema:`Objective : Model <OME-2015-01/ome_xsd.html#ManufacturerSpec_Model>` * :schema:`Objective : NominalMagnification <OME-2015-01/ome_xsd.html#Objective_NominalMagnification>` * :schema:`Pixels : BigEndian <OME-2015-01/ome_xsd.html#Pixels_BigEndian>` * :schema:`Pixels : DimensionOrder <OME-2015-01/ome_xsd.html#Pixels_DimensionOrder>` * :schema:`Pixels : ID <OME-2015-01/ome_xsd.html#Pixels_ID>` * :schema:`Pixels : Interleaved <OME-2015-01/ome_xsd.html#Pixels_Interleaved>` * :schema:`Pixels : PhysicalSizeX <OME-2015-01/ome_xsd.html#Pixels_PhysicalSizeX>` * :schema:`Pixels : PhysicalSizeY <OME-2015-01/ome_xsd.html#Pixels_PhysicalSizeY>` * :schema:`Pixels : SignificantBits <OME-2015-01/ome_xsd.html#Pixels_SignificantBits>` * :schema:`Pixels : SizeC <OME-2015-01/ome_xsd.html#Pixels_SizeC>` * :schema:`Pixels : SizeT <OME-2015-01/ome_xsd.html#Pixels_SizeT>` * :schema:`Pixels : SizeX <OME-2015-01/ome_xsd.html#Pixels_SizeX>` * :schema:`Pixels : SizeY <OME-2015-01/ome_xsd.html#Pixels_SizeY>` * :schema:`Pixels : SizeZ <OME-2015-01/ome_xsd.html#Pixels_SizeZ>` * :schema:`Pixels : Type <OME-2015-01/ome_xsd.html#Pixels_Type>` * :schema:`Plane : ExposureTime <OME-2015-01/ome_xsd.html#Plane_ExposureTime>` * :schema:`Plane : TheC <OME-2015-01/ome_xsd.html#Plane_TheC>` * :schema:`Plane : TheT <OME-2015-01/ome_xsd.html#Plane_TheT>` * :schema:`Plane : TheZ <OME-2015-01/ome_xsd.html#Plane_TheZ>` * :schema:`Plate : ColumnNamingConvention <OME-2015-01/SPW_xsd.html#Plate_ColumnNamingConvention>` * :schema:`Plate : ExternalIdentifier <OME-2015-01/SPW_xsd.html#Plate_ExternalIdentifier>` * :schema:`Plate : ID <OME-2015-01/SPW_xsd.html#Plate_ID>` * :schema:`Plate : Name <OME-2015-01/SPW_xsd.html#Plate_Name>` * :schema:`Plate : RowNamingConvention <OME-2015-01/SPW_xsd.html#Plate_RowNamingConvention>` * :schema:`PlateAcquisition : ID <OME-2015-01/SPW_xsd.html#PlateAcquisition_ID>` * :schema:`PlateAcquisition : MaximumFieldCount <OME-2015-01/SPW_xsd.html#PlateAcquisition_MaximumFieldCount>` * :schema:`PlateAcquisition : WellSampleRef <OME-2015-01/SPW_xsd.html#WellSampleRef_ID>` * :schema:`ROI : ID <OME-2015-01/ROI_xsd.html#ROI_ID>` * :schema:`Well : Column <OME-2015-01/SPW_xsd.html#Well_Column>` * :schema:`Well : ID <OME-2015-01/SPW_xsd.html#Well_ID>` * :schema:`Well : Row <OME-2015-01/SPW_xsd.html#Well_Row>` * :schema:`WellSample : ID <OME-2015-01/SPW_xsd.html#WellSample_ID>` * :schema:`WellSample : ImageRef <OME-2015-01/ome_xsd.html#ImageRef_ID>` * :schema:`WellSample : Index <OME-2015-01/SPW_xsd.html#WellSample_Index>` **Total supported: 64** **Total unknown or missing: 411**