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You are here: Home Community Minutes Mini Group meetings OMERO/HIC Meetings 2011.03.09 OMERO/HIC Kick-Off

2011.03.09 OMERO/HIC Kick-Off

Attending: Jason, Josh, Chris, Andy, Simon, Jean-Marie, ...

Action Items

  • We (DEV TEAM) will work with an anonymised subset of the GoDARTS data as the basis for the pilot

  • We will define a couple of analyses that can be demonstrated

  • We will define the requirements, stories and tasks

  • We will work on porting a couple of key scripts (e.g. genome imputation, date of death validation, drug exposure)

  • The initial focus (i.e. for the Wellcome visit) will be on developing basic tool(s) for data loading, querying, and export all of which are to be audited; the researchers will then use the exports as usual with their preferred tools.

  • The overall focus will be on developing APIs for a key set of defined tools, (e.g. R, STATA, PLINK, VCFTOOLS) so that these can interact directly with the OMERO architecture

  • We need to decide on a project name - current favourite is '', if you have any suggestions please fwd them to me.

  • We need to decide on the physical location for hosting the pilot data - I think we are leaning towards HIC (on the UNI network).

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