Personal tools
  • We're Hiring!

You are here: Home Community Minutes Conference Calls 2017 2017-05-16 Tuesday Team Meeting

2017-05-16 Tuesday Team Meeting

Dundee: Will, Petr, Dominik, Kenny, Ola, Jason, Mark, June, Jean-Marie, Helen, Simone, Balaji, Chris, Roger, Remote: Josh, Sebastien, Andreas, Melissa, Wilma, Liza, Eleanor, David, Emil

Agenda - 2:00pm Start

  1. Accepting minutes from last meeting

  2. Project Timelines (2-3 minutes each)

    1. Spaces

      1. Files/Formats/OME Files (Sebastien)
        • Users meeting prep in progress.
        • Run-through talks 2.15 tomorrow
        • Other bug-fixes ongoing - maybe release before meeting
        • IDR work rebased on mainline - couple of bugs found e.g. h5 reader
      2. Metadata (Josh)
        • Paper status - accepted!
        • Data status - No releases planned.
        • POTN: minke, orcas, oh my (& presentations)
        • idr will get demo’d.
        • Analysis needs 5.3. BF 5.4
        • Need to generate more BF caches
        • Josh: I have several Read-Only OMERO servers running
        • Use minke: 5 * 26 cores for Jupyter notebooks
        • Notebook edit workflow - update & diffs.
        • Maybe investigate plugins to upload to github?
      3. OMERO 5.3.2 (J-M)
        • 5.3.2 out today
        • No PR review, focus on users-meeting OMERO the slow pulse boy...
        • Want to release iviewer first version next week. 0.1.0
        • Josh: will try to deploy this on OME2017
      4. OMERO 5.4.0-m1 (Petr/Mark)
        • performance for real-world tasks now looking good
        • merged v5.3.2 in, tests now running
        • now ready for Josh to review overall code diff
        • Petr completing and polishing integration tests
        • remaining client work
      5. Outreach
        • Jason: Dubrovnik ELMI meeting next week. Vendors discuss BF contrib
        • Also talk about IDR
        • Cytohack in London (29 June)
    2. Other releases/upgrades:

      1. Figure
        • No PR review
      2. Mtools bug-fix & release 1.3.1
      3. iviewer
        • Fix some bugs following comments
        • Feel free to play and add comment to feedback
      4. new website
        • Helen: Liza adding icons and images
        • Updating downloads page (see PR)
        • Linkchecker in progress
      5. Sysadmin (current board and recent PRs)
        • nightshade on to new hardware
        • Ansible prep paid off!
        • Minor Red-Hat & GPFS issues
        • Will upgrade to latest OMERO
        • Windows systems ransomware patching (7 systems)
        • Josh: Jenkins still firewalled
        • Chris: MacOSX (10) malware cases recently, opensource installers infected, e.g. ‘handbrake’
        • Be careful!
        • Jason: Targeted e-mails etc
    3. Glencoe Update (Chris)

      • webinar public http://static-movie-usa.glencoesoftware.com/mp4/webinar/946c2095-d0a8-4849-a019-a8cfe317f2bb.mp4
      • Jupyter notebooks etc
      • Handling of multi-channel IF images well-suited to OMERO
      • Pathviewer 2.0 will be for OMERO 5.3 only
      • Will start using 5.3. JSON API.
      • Need to handle custom storage of ROIs/Annotations/Tables
    4. User meeting update

      • only ten more working days until the meeting
      • workshop practices? First run-through for all this week
      • Formats & Web tomorrow
      • June 2 meetings and meeting rooms:
        • M-floor meeting room 9-4
        • Murray seminar room 9-6
        • Street all day 9-6
        • 2.38 all day 9-6
        • 2.37 9-2
      • Desking outside ‘fishbowl’ available
      • Jason: putting together slides for keynote project update - need screenshots
      • Roles, BF etc, etc.
      • Jason: Thanks to Ola for youtube videos
Document Actions