2015-05-12 Tuesday Team Meeting
Dundee: Petr, Kenny, Mark, Ola, Gus, Jean-Marie, June, Simon, Helen, Roger, Balaji, Will Remote: Ian, Colin, Kelli, Josh M, Melissa, Wilma, Eleanor, Andreas, Curtis, Josh B, Emil
Agenda - 2:30pm Start
Accepting minutes from last meeting
- accepted
Project Timelines (2-3 minutes each)
Core (incl. CI & QA) - 14:30 UK
- 2 weeks until freeze
- 7 cards end of this week
-
+100 tickets
- Josh M: some will have to be pushed, though 5.1.3 is already quite full, maybe clean up tickets after Paris
-
Big pushes to watch out for?
- Josh M: remember that QA requires adequate warning for testing
- Jean-Marie: … and that Petr is off next week
-
Ola: read-write groups requires testing
- Jean-Marie: will discuss tomorrow, may need to be pushed
- Jean-Marie: also need to discuss ROI / annotations
- Melissa: in good shape, few tickets remaining
Glencoe Update (Chris) - 14:34 UK
- Josh M: populate metadata script work in progress, plenty of bugfixing
- Josh M: the populate metadata script will be needed for Eleanor
Repositories - 14:36 UK
Virtual Microscope/teaching
- nothing new
IDR Project (Eleanor)
- working on getting all metadata for Sysgro yeast and JCB proteome plasticity high content screens
- refinement of a standard template for study metadata
- starting to transfer Sysgro dataset (11 Tb) to EBI then Dundee.
- issue of getting ontology in OMERO
- Josh M: further discussion about hardware, installation probably to start in early June. Request to focus on Storage before compute.
FLIMfit/OPT (Ian) - 14:38 UK
- bugfix version released
-
testing against 5.1, looking good
- revealed some problems not specific to 5.1, so may release a 5.1-compatible version before those are fixed
Bio-Formats large file sets (Sebastien B) - 14:39 UK
- no news
Other consortium timelines (5 minutes) - 14:39 UK
- Curtis: saw Sebastien, talked with Jason and Niko at AQLM
-
Curtis: working on typed location interface instead of just passing around strings with IDs
- progress is enabling for scijava-common
AOB (5 mins max - technical discussions should be highlighted to relevant people and rescheduled) - 14:41 UK
- June: Paris registration closes today, around seventy now
Deployment / Public repository Paris workshop practice (Ola) - 14:42 UK
- presentation
-
Josh M: some information good for facility admins, some is in-depth developer stuff, good to name the presentation well and make sure the audience knows what they are getting
- Ola: will update presentation with the new title
-
Will: views, templates, etc., may not be familiar to facility admins
- Ola: will shrink, adjust order
-
Jean-Marie: make it clear that public user does not override existing OMERO permissions system, it is an extension, not a back door
- Ola: will be clearer about creating separate public group, user
- Be careful in saying “override the permission system”
- Ian: confused about “owner-agnostic” when data is still actually owned, didn’t recognize it as basically what Imperial have already done
- Balaji: can be harder when the code is seen before the later screenshot
- Will: make it clear that screenshots from other custom apps are not part of OMERO.web
Done 15:10 UK