2015-04-21 Tuesday Team Meeting
Dundee: Petr, Kenny, Mark, Roger, Gus, Will, Jean-Marie, Helen, Dominik, Colin, June, Simon, Emil, Balaji Remote: Josh M, Sebastien B, Kelli, Curtis, Ian, Douglas
Accepting minutes from last meeting
- accepted
Project Timelines (2-3 minutes each)
Core (incl. CI & QA) - 14:29 UK
Good cleanup of tickets & cards
Freezes
-
B-F frozen (barring C++); merged-freeze tomorrow
- Jean-Marie: will not include all LIF fixes, too much to do, some tests wrongly green
- OMERO PR-opened-freeze is this Thursday EOB (23rd)
- PRs-merged-freeze: 24th
- Doc-freeze 27th.
- Goal: release is 30th of April
-
B-F frozen (barring C++); merged-freeze tomorrow
Petr: no big changes for testing plan on QA board
Petr: indexer out of memory
- Sebastien B: appears sporadically on trout, but do not know how to trigger it
Glencoe Update - 14:37 UK
- Jean-Marie: could use some of Emil’s code for C++ training examples
- Josh M: continuing work on very large imports, for 5.1 and 5.2
Repositories - 14:40 UK
Virtual Microscope/teaching
- nothing
IDR Project (Jason, Eleanor, Gabry not present)
- aspera testing soon. FTP location at EBI has been set up and Aspera requested for this location.
- trying to get data onto faster locations
- Cellular Microscopy Phenotype Ontology (CMPO)- Simon Jupp at EBI will generate Webulous templates for the ontology design patterns identified for phenotypes so that new ontology terms can be quickly added to CMPO.
- work to identify metadata requirements for the Chromosome Condensation Screen data set is continuing.
- hardware order gone to purchasing, no further news yet
FLIMfit/OPT (Ian) - 14:41 UK
-
Started testing against 5.1 VM locally.
- generally good but would appreciate chat with Jean-Marie about a 5.1 issue
-
Started testing against 5.1 VM locally.
Bio-Formats large file sets (Sebastien B) - 14:42 UK
- more memoizer use coming (multi-user issues)
Other consortium timelines (5 minutes) - 14:42 UK
- Will: Kenny & Simon have installed latest OMERO.figure on nightshade
- Jean-Marie: in due course, intend to move OMERO.figure under openmicroscopy banner
- Curtis: switched Fiji and components to Bio-Formats 5.1
- Curtis: working on update site issues
AOB (5 mins max - technical discussions should be highlighted to relevant people and rescheduled) - 14:45 UK
Paris workshops program (Jean-Marie)
-
program to be up on website by end of this week, so workshop schedule to be finalized
- any other workshop ideas, add to card today
- note on card preferences regarding first, second, last, etc. for ordering
- Helen can add information to website as it comes (list of speakers)
-
plan to repeat workshops so that people are more able to attend those they wish
- two runs each 40-45 min, e.g., morning and afternoon
- some modules can be somewhat free-form, especially third-party tools, and developer track
-
program to be up on website by end of this week, so workshop schedule to be finalized
Josh M: posters for Paris?
- Douglas: intends one
- Ian: would be useful for Yuriy’s OPT work
Done 14:54 UK