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You are here: Home Community Minutes Conference Calls 2012 2012-02-28 Tuesday Meeting

2012-02-28 Tuesday Meeting

Attending: Chris, Jason, Josh (notes), Andrew, Colin, Dom, Donald, Emma, Jean-Marie, Liza, Melissa, Scott, Elwood (notes), Stick, Will, Ola (14:07), Carlos, Sebastien (14:27), Mark Hiner (14:28-15:00), Curtis (14:52)

Remember: Agenda must be complete (with estimated times) on the day before the meeting. Any additions after that must go at the bottom (AOCB)

Housekeeping Pre-Meeting - 2pm Start

  1. Matters Arising (<10 mins)

    • Josh: pdf to sphinx - Done; email sent to nitpick; see AOCB
    • Andrew: check mailing lists - mail arrived from Curtis/Gregory/Ian - Done
    • Emma: contact satellites about getting private code onto github Discussed, but not done as Chris sent devel email - will remind everyone when circulating dev meeting notes
    • Will: contact Martin about publishing ome-xml files - Done
    • JM: email about merge blue Done
    • Josh+Ola: gitsvn. Done, initially private
  2. Email and Forum Review - checked at 10:58 (5 mins)

Agenda - 2:30pm Start

  1. Accepting minutes from last meeting

  2. Sprint Bug Report (5 mins)

    • Closed bugs: 17 (1 blocker, 4 critical, 6 major, 6 minor)
    • New bugs: 11 (1 blocker, 1 critical, 4 major, 5 minor)
    • Total bugs: 87 (4 blocker, 10 critical, 24 major, 49 minor)
  3. Sprint Tickets/bugs

  4. Minigroup Updates (points for Sprint page)

    • HIC
    • Model
    • Web
    • Insight
    • FS
    • Usability
    • Bio-Formats
      • status of Jenkins jobs
      • repository permissions
      • OME-XML-based testing
    • Chgrp
    • Docs
    • Big images / learning
  5. Planning for People Taking Leave (5 mins)

  6. Hiring Strategy

  7. Satellite Update

  8. Glencoe Update

  9. Any other business (<5 mins)

Notes

Attending

*  Chris, Jason, Josh (notes), Andrew, Colin, Dom, Donald, Emma, Jean-Marie, Liza, Melissa, Scott, Elwood (notes), Stick, Will, Ola (14:07), Carlos, Sebastien (14:27), Mark Hiner (14:28-15:00), Curtis (14:52)

Housekeeping Pre-Meeting - 2pm Start

  1. Matters Arising (<10 mins)

    • Josh: pdf to sphinx - Done; email sent to nitpick; see AOCB
    • Andrew: check mailing lists - mail arrived from Curtis/Gregory/Ian - Done
    • Emma: contact satellites about getting private code onto github Discussed, but not done as Chris sent devel email - will remind everyone when circulating dev meeting notes
    • Will: contact Martin about publishing ome-xml files - Done
    • JM: email about merge blue Done
    • Josh+Ola: gitsvn. Done, initially private
  2. Email and Forum Review - checked at 10:58 (5 mins)

    • Email - none pending

    • Forums - * Jacques2020 Re: Insight fails to retrieve thumbnails using 4.3.3 Chris/Josh to discuss

    • QA -
      link

      ID    Status    User/email    Type    Created    Selected file    Comment    Error
      4224    new    m.porter@dun...    Insight 4.3.3    2012 02 24    -    I was analysing histograms of ...    java.lang.Exception: java...
      4223    new    unknown    Web 4.3.3    2012 02 24    -    -    Traceback (most recent ca... **OLA**
      4222    new    leek@broadin...    Insight 4.3.3    2012 02 22    -    I had the acquisition pane ope...    java.lang.Exception: org....
      4221    new    lem@stowers....    Insight 4.3.3    2012 02 22    -    -    java.lang.Exception: org....
      
    • Done: 14:13 UK

Agenda - 2:30pm Start

  1. Accepting minutes from last meeting

    • DONE
  2. Sprint Bug Report (5 mins)

    • Closed bugs: 17 (1 blocker, 4 critical, 6 major, 6 minor)
    • New bugs: 11 (1 blocker, 1 critical, 4 major, 5 minor)
    • Total bugs: 87 (4 blocker, 10 critical, 24 major, 49 minor)
    • Jean-Marie: closer to 90 marker.
    • Emma: take some each week if you can
  3. Sprint Tickets - Started 14:30 UK

    • Chris: things lingering from modelling, has been cleaned up but lots have been added. All in same story and in same sprint
    • Jean-Marie: as said last week, we need to avoid putting them all into the current sprint.
    • Jean-Marie: work starting to align model and db, xsd-fu and roi for sprint 10, leave db upgrade for now
      • 1st round chris, will, andrew chris will be involved, may need others to help testing
    • Page on trac from Andrew indicating decision on db/model changes
    • Chris: Simons lingering tickets? VM is left.
    • J-M: cleaned up Brians and Donalds
  4. Minigroup Updates (points for Sprint page) - Started 14:33 UK

    • HIC
      • Emma: Waiting on data
    • Model
      • Jean-Marie: As above.
      • Tickets for all alignments.
      • Work starts this coming sprint (10) - code-gen, stylesheets, etc.
    • Web - 14:36 UK
      • Ola: getting to end of refactoring code, some issues with some of the last branches. cleaning these up. In March several of us are involved in ROI
      • Chris: milestone page updated with new things
        • more important admin things is the decision to remove a lot of sub application from the main repository, webpublic, webmobile will be own repositories
        • Will: webtest staying in main release but disabled
      • Will: change group support still a lot to decide
      • Chris: feedback welcomed on separation
    • Insight - 14:38 UK
      • Multi-group support is merged into mainline
      • Like with web, some modifications that need to happen for chgrp
      • Discussion: how to handle multi-server (issues like multi-versions)
        • But this will be coming.
      • Have been exposing model/downgrade from user perspective.
    • FS
      • Colin: issued pull request on work done so far, 102. lots of changes, importing SPW big images, ordinary inages. will require import testing. need to integrate with insight. thumbnail needs looking at, multi-image set
        • refactoring of repository service
        • hopefully get it built and tested
    • Usability - Started 14:41 UK
      • Scott: all documents and screenshots except roi and datamanager are on git now, just last commit on roi screenshots, then on to datamanager
        • currently on own machine, what data can be used for training and movies
        • spoke to colin about coping data over for movie training
        • Colin: fs copy, run script on meta data import
      • JM: email to facility manager?
        • Scott: feedback from Alexia waiting on others
      • Emma: Gus starts in a couple of weeks
    • Bio-Formats - Started 14:44 UK * status of Jenkins jobs * melissa: all the painful parts done, 4 failing 2 unstable should be cleaned up soon * repository permissions * blocker: dont have write permissions on data repository for config files * Chris: problem across the board... the way we are receiving nfs volume is different, need to assign permissions across the board for dirs and dir structs. * Even more difficult if people touch via samba and NFS. * Prefer: no one write anything over NFS. Wont scale with data repo. (Same issues as the team folder) * Probably initially pass ownership to Melissa.
      • OME-XML-based testing
      • Josh: submodule-based build system, not copying jars
    • Chgrp
      • Josh: omero.group fucntionality, wrapping it up with Carlos
      • Josh: similar to what will and jm did
        • large branch in next week or so, chris decorator branch might be prepared
        • start merging in call context branch (josh/3529-callcontext)
        • will go back to finishing of previous change group branch
    • Docs - 14:51 UK
      • As above.
    • Big images / learning
      • Emma: access performance
      • Chris: need numbers from the server to speak to Jonathan Monk to move to different hardware.
      • Emma: not use largest pyramid?
      • Chris: no difference, just overhead causing issues
      • Emma: Lifesci-repo
        • Jason: where are we?
        • Emaa+Chris: Need to assess who, what where for setup
  5. Planning for People Taking Leave (5 mins)

    • Emma: one after the other, people are starting to take leave.
    • Emma: OME Holiday / Scheduling. Will liaise with Angie.
    • Chris: google groups fiasco doesnt work, share via jrslab?
    • Josh: notifications cant get via that.
  6. Hiring Strategy - Started 14:57 UK

    • Josh+Chris: Skype interview NIH position
    • Emma: discussion around next round of recruitment
    • Emma: next round more specific positions.
    • Speak up if you know of specific positions.
  7. Satellite Update - Started 15:00 UK

    • Jean-Marie: Discussion following dev meeting FLIM storage, Woolz format.
  8. Glencoe Update

    • Jason: Carlos to upgrade JCB to 4.4 / 4.3+
      • Ensure we have recent an up to date code.
  9. Any other business (<5 mins)

    • sphinx doc (Josh) - Started 15:12 UK
      • nitpick: no responses
      • Jason: cF. Nature letter.
        • Curtis: dont talk about process.
      • Curtis: limits to things we should published.
        • Use team/hires or whatever.
    • SCIFIO merge strategy (Curtis & Mark)
      • Curtis: question / schedule a time for discussion. scifio merge strategy, pain from on a separate branch falling out of develop, as we restructure each format, any bug fixes dont get pulled in. merge things in to develop as they are done. backwards com.pat. is important
      • Josh: we were trying to get the API setup, not comfortable merging in a large amounts
      • Curtis: APNG, ICS is the one that highlighted this issue if we wait for too long. need a strategy for keeping in synch, need a few handful of iterations.
  10. Meetings (Fridays, 3PM GMT)

    • Backport OMERO.web to 4.1 - started 15:21 UK
      • Jean-Marie: can we close that story? @carlos Done
    • roi meeting
      • Jason to send email.
    • QA repository.
      • Josh: its now private can we go public? * Ola: clean the database files
    • chgrp branch
      • Josh: manda in AUS, will? : use mainline and see where she is
      • Will: no bugs in develop compared to the branch she is using
  11. Done: 15:25 UK

Actions

* Chris/Josh: discuss psql access from scripts.
* Jean-Marie: Send deprecated email to ome-devel
* Josh: contact Sebastien about Matlab
* Chris: handle write-access on repo with Melissa
* Calendaring mini-group!
* Jean-marie: close 4542 - backport OMERO.web
* jason: email about roi meeting
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