2011-04-07 Thursday Meeting
Attending: Brian, Jason, Chris, Carlos, Josh, Melissa, Will, Simon, Andrew, Donald (14:30)
Agenda
Remember: Agenda must be complete (with estimated times) on the day before the meeting. Any additions after that must go at the bottom (AOCB)
Apologies: Scott, Ola, Jean-Marie are away at 'OMERO in Action'
Accepting minutes from last meeting
Matters Arising (<10 mins)
- Put in outstanding action points from last Thursday or Tuesday meeting
- JMB: Forward email from Jerome (with PDF) to team
- Jason: Invite Spencer to next week's meeting for Workshop Post Mortum?
- Will: Email community and alert to blitz gateway changes
- Will: look at changes pending to blitz and schedule another meeting
- Ola: Field size for XYZ panel needs fixing (should be ticket for this already)
- Team: look at new insight-import features, feedback welcome. Look for bugs!
- Andrew: Send Jason stats - done
- Andrew: Clean award for photograph
- Andrew: Sorting through t-shirts. Sent 2 x S, 2 x M, 2 x L, 2 x XL, 1 x 2XL from old ASCB (Most 2010, some 2009, one 2008)
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Workshop Team: Remember screenshots on Milestone page - PENDING
- Chris: Josh and I will try to make a current features page for this
- Chris: Reply to "copy all metadata" question from Jerome - PENDING
Generating sprint # (45 mins)
- What New Tasks were added to old sprint
- What Tasks are left in old sprint
- Make new sprint
- Estimates
- Close old sprint and move other tasks into new sprint
Email and Forum Review - checked at (5 mins)
Email - none
Forums - Re: Recovering Metadata on tile positions - continuation of old conversation
QA -
link| All | Importer Comment | Importer Bug | Insight Comment | Insight Bug | Test Engine Bug | Web Bug | QA Bug | ID Status User/email Type Created Selected file Comment Error 3668 new m.porter@dun... Insight 4.2.2 2011 04 06 - I right-clicked an ROI shape i... java.lang.Exception: org.... 3667 new ch-n@gmx.net... QA 2011 04 06 - - - 3666 new unknown Web 4.1.1 2011 04 05 - - Content-Type: text/html ... 3665 new jason@lifesi... Insight 4.3-DEV 2011 04 05 - Mousing over thumbnails gives ... - 3664 new helio.roque@... Insight 4.2.2 2011 04 04 - Dear OMERO developers, I have... - 3663 new helio.roque@... Insight 4.2.2 2011 04 04 - After moving a roi pressed sav... java.lang.Exception: org.... 3660 new jason@lifesc... Insight 4.3-DEV 2011 04 03 - Closing screen view, after loa... java.lang.Exception: Abno... 3655 new n.y.patel@du... Insight 4.2.2 2011 04 01 - Looking at older images, befor... java.lang.Exception: Abno... 3647 new jason@lifesc... Insight 4.3-DEV 2011 03 30 - viewing plates with ROIs. java.lang.Exception: org....
Any other business (<5 mins)
In Attendance
Brian, Jason, Chris, Carlos, Josh, Melissa, Will, Simon, Andrew, Donald (14:30)
Notes
Apologies: Scott, Ola, Jean-Marie are away at 'OMERO in Action'
Accepting minutes from last meeting 14:00
Matters Arising (<10 mins)
- Put in outstanding action points from last Thursday or Tuesday meeting
- JMB: Forward email from Jerome (with PDF) to team -- DONE
- Jason: Invite Spencer to next week's meeting for Workshop Post Mortum? DONE
- Will: Email community and alert to blitz gateway changes - DRAFT DONE, (Discucsion coming later today)
- Will: look at changes pending to blitz and schedule another meeting - SEE NOTE ABOVE
- Ola: Field size for XYZ panel needs fixing (should be ticket for this already) - TICKTED
- Team: look at new insight-import features, feedback welcome. Look for bugs! - PENDING Mondays Code Updates
- Andrew: Send Jason stats - DONE
-
Andrew: Clean award for photograph - IN THE WORKS
- Case measured
- Andrew: Sorting through t-shirts. Sent 2 x S, 2 x M, 2 x L, 2 x XL, 1 x 2XL from old ASCB (Most 2010, some 2009, one 2008)
-
Workshop Team: Remember screenshots on Milestone page - SENT DOWN
- Chris: Josh and I will try to make a current features page for this - SORTED
- Chris: Reply to "copy all metadata" question from Jerome - IN THE WORKS. Email mostly done. Will send out after finished
Generating sprint # (45 mins) - 14:15
- What New Tasks were added to old sprint
- What Tasks are left in old sprint
- Make new sprint
- Estimates
- Close old sprint and move other tasks into new sprint
-
Summary
- Chris: LOTS of dangling stuff around this sprint (lots of 80% done tickets)
- Josh: By and large lots of breaking work done
-
Jason: Hopefully next spring will 'over produce' as a result
- Chris: Should see lots close in the next few days
- Last several sprints: 140 -> 105 -> 75 -> 60. Looking to have 100 tickets in the next sprint.
-
Will: should we create all the sprints up to the release?
- Chris: probably for sprint planning, we should create all that are left
- We were hoping to get down to zero (single digits?) in backlog for end of next sprint
- Jason: let's go through tickets in detail
-
Upcoming merges / Testing
- New database on Monday - should wait for testing till then
- Similarly for the new Big Images API
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Chris: Need to have testing scenarios
- NB: Jean-Marie is away next week
- Will, have you looked at the updates?
- Josh: we will also need a phase of upgrade testing (scripts not ready yet)
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Melissa: do we have the definitive list of the new formats
- Not yet. Can just diff readers.txt in bf
- Confident with volocity? Yeah, all datasets are opening
- How much metadata? PhysicalSize, image name, channel names, magnification, detector name
- Jason: round of applause for Melissa
Email and Forum Review - checked at (5 mins) - 14:30
- Email - none
- Forums - Re: Recovering Metadata on tile positions - continuation of old conversation
-
QA -
link * ID Status User/email Type Created Selected file Comment Error * 3668 new m.porter@dun... Insight 4.2.2 2011 04 06 - I right-clicked an ROI shape i... java.lang.Exception: org.... * 3667 new ch-n@gmx.net... QA 2011 04 06 - - - * 3666 new unknown Web 4.1.1 2011 04 05 - - Content-Type: text/html ... * 3665 new jason@lifesi... Insight 4.3-DEV 2011 04 05 - Mousing over thumbnails gives ... - * 3664 new helio.roque@... Insight 4.2.2 2011 04 04 - Dear OMERO developers, I have... - * 3663 new helio.roque@... Insight 4.2.2 2011 04 04 - After moving a roi pressed sav... java.lang.Exception: org.... * 3660 new jason@lifesc... Insight 4.3-DEV 2011 04 03 - Closing screen view, after loa... java.lang.Exception: Abno... * 3655 new n.y.patel@du... Insight 4.2.2 2011 04 01 - Looking at older images, befor... java.lang.Exception: Abno... * 3647 new jason@lifesc... Insight 4.3-DEV 2011 03 30 - viewing plates with ROIs. java.lang.Exception: org.... * 3667 (QA for file) - Melissa looking into it - Many of the QAs come from nightshade's disk filling up. * Nightshade is currently almost full so lots of the above errors are caused by this. * Chris will get Jason the details so he can delete some data * Chris: Third highest user also said, "I'm not using OMERO anymore" * Jason: this is a great use case for bulk export * Jason: users who stand out: Emma King, Phillipe, Nazan * Also: Roman Li and perhaps Zuojun (delete's not working; see email from November 24th) * Jason: Would really like to log in and decide what goes!
Any other business (<5 mins)
-
Jason: Norwich
- Pretty impressive; many from the UK, a couple from the continent
- Imperial: Convincing people to use OMERO (workflow as it stands)
- Geneva: integrated analysis
-
Jerome: "render on the server"
- We will push hard to get it running in Dundee
- A lot of people starting to use it in anger
- A lot coming online
-
Message: "OMERO is a platform that is ready for use" (Mark Woodbridge)
- includes server & API
- clients as they exist, but satisfy some people's workflows
- aren't fully competent
- you probably have to expect to have someone who can work with the clients and update them
- insight has a large burden to understand
- web is easier
- installation issues abound
-
Christoph Best
- talking about how Google works with data
- OMERO is the type of tech they're using, and in the way it should be done
-
number of potential success stories
- at least 4 people asked, how do I get my hands on analysis scripts (matlab, etc.)?
- isn't it time to start running a repository.
- people aren't talking about a webpage with scripts
- they want analysis by facebook, i.e. a platform for collaboration
- Josh: Knime is using Eclipse upgrade sites, and several big entities are getting involved
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Will: myexperiment has an entire project based on exactly this (originally Taverna)
- Accreditation if someone uses your script
- "This script was adapted from that script"
- Very similar environment.
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ImageJ in the cloud (josh)
- Josh: not sure if we should respond
- Chris: there's not exactly an overlap
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Jason: in Norwich there were comments about improving the integration with ImageJ
- Possibly sitting down with Johannes for coding
-
Jason: Norwich
Action Items
* Team: Reconcile merges with burndown next TUESDDAY
* Jean-Marie: create all sprints til release
* Brian/Scott: finalize the testing scenarios - FRIDAY. Reassign tasks based on what's done now
* Melissa: define new formats need to be tested
* Brian: prepare test_images_good with Melissa's list
* Jason: Try to delete group member data from 4.2.2 insight
* OR Chris: reset passwords for Elena and Emma
* Josh: Delete data for Zuojun (id=2914)
Previous:
2011-04-05 Tuesday Meeting
