2010-10-21 Thursday Meeting
Attending: Brian, Andrew, Colin, Ola, Chris, Josh, Donald, Melissa, Brian Jones, Jean-Marie
Agenda
Remember: Agenda must be complete (with estimated times) on the day before the meeting. Any additions after that must go at the bottom (AOCB)
Accepting minutes from last meeting
Matters Arising (<10 mins)
- Jason: Follow up with Frankfurt and their EMDB needs
- Melissa takes over LIF issue from Jean-Marie
- Brian: Make sure last test_good bug in Chris' hands
- Josh: still needs to contact Jerome re: public login
- Ola: re-test wildcard *tiff searches
- Adjust version numbers across the board.
- Tag version for QA by Thursday
- Ola reviews web tickets and either assigns to herself or removes herself for someone else to handle
- Chris & Donald: Alternative storage
- Chris: makes RW groups on nightshade
- Chris: will try to get drivespace reporting working.
- Andrew: adds logos to the front page of the website - done (But do we need a different strap line?)
SPIM (10 mins)
- Problem with reference IDs for anything below instrument. (Works in file but not in OMERO.server)
Generating sprint # (45 mins) (Include this section every other week)
- What New Tasks were added to old sprint
- What Tasks are left in old sprint
- Make new sprint
- Estimates
- Close old sprint and move other tasks into new sprint
Email and Forum Review - checked at (5 mins)
Email -
- Andrew's storing single plane OME-TIFFs mail
Forums -
- Re: Export to external/remote collaborators also mailing list post about iRODS
QA -
linkID Status User/email Type Created Selected file Comment Error 2954 new jason@lifesc... Web 4.2.0-r757 2010 10 20 - looking at shared data-- in a ... Traceback (most recent ca... 2953 new HMS-support@... Web 4.2.0-r757 2010 10 20 - Using OMERO.web to access a da... Traceback (most recent ca... 2952 new i.porter@lif... Insight 4.2.0 2010 10 20 - opening insight java.lang.Exception: Abno... 2951 new m.spitaler@i... Importer 4.2.0-DEV 2010 10 19 14.10.2010 tiling_2.lif The data contain a set of tile... java.lang.RuntimeExceptio... 2950 new k.klotz@dund... Insight 4.2.0 2010 10 19 - Saving files second time in 1... java.lang.Exception: Abno... 2899 new clzbrown@dun... Web 4.2.0-r757 2010 10 12 - - Traceback (most recent ca... 2893 new n.r.stanleyw... Web 4.2.0-r757 2010 10 12 - seemed to be a problm..... Traceback (most recent ca...
Any other business (<5 mins)
Notes
Accepting Minutes: Accepted
Matters Arising
- Jason: Still pending his repsonse about Frankfurt (Acilleas)
- Brian: Handed off, but investigating some things for Chris re: this ticket
- Josh: Already replied to post for public login
- Ola: will write a test for searching
- Version numbers are adjusted (Melissa wil update hers a well)
- Builds are not tagged.
-
Web
- Ola: Still working on a few tickets (8 or so left).
- Chris: worked on web startup.
- Chris: Holding off on ice-grid-node changes (not enough time left)
- Fix that at the same time as the static config files.
- Keep default, but don't publish it as good starting point
- Ola: will set up 3 levels of documentation for users/developers/admins
- Donald/Chris: Are working on their Alternatve Storage presentation
-
Chris: Still pending on nightshade RW and drivespace reporting
- web drivespace is broken
- Andrew: Added logos to website, waiting for feedback
- Jean-Marie: LIF issue was Peter Lipp; he managed to import, problem fixed.
SPIM
-
IDs referring to objectives don't work from XML blocks.
- Not maintained when imported into OMERO (IDs lost on import)
- Need a way to reference the multiple objectives
- Since Unique LSIDs are problematic, may have to live with files not being linked correctly
- Andrew will write a proposal for feedback
- Will need to look at removing unique contraints and review ULSID use in the future
-
IDs referring to objectives don't work from XML blocks.
Deletes
-
Seem to be taking longer then expected, needs investigation
- Large deletes that should take 10-15 mintues were taking 40 minutes!
- Josh commited more logging to track large scale deletes
-
Jean-Marie: Is this a linking issue with Michael's images?
- Chris: Don't think so
- Still needs more testing. Being investigated by Chris/Josh
-
Seem to be taking longer then expected, needs investigation
Generating Sprint #
-
Remaining Tasks:
-
Jean-Marie: Big issue is permission right now
- Chris: Ola and Chris discussed this issue today
- Chris is going to put some test cases in place to look at some of the permission issues
- Jean-Marie: Maybe some caching issue with thumbnails here
-
Jean-Marie: Big issue is permission right now
-
New Sprint:
- Jean-Marie: We are in the middle of sprint 18, do we need a new sprint? No
-
Testing
-
Redoing scenario 21 now or wait on Ola?
- Ola: fine to start now, but don't duplicate tickets please
- Josh is reassinging all tickets in 21 again.
- Colin is taking #3068 and Chris is taking #3066 (Jean-Marie's tickets)
-
Redoing scenario 21 now or wait on Ola?
- Either build a loader or disable the DTD loading?
- Melissa: Only time she's seen this error was when she accidently downloaded the wrong thing
- Josh will retest to make sure his file is OK.
-
Remaining Tasks:
Email/Forums
- Export to Collaborators Forum message: Josh will respond
- Brian will test QA5951 lif images (should be fixed now)
- QA2893 and related bugs: Ola is going to look into it
-
Andrew storing single plane OME-TIF mail: Is this the way we want to go?
- Curtis liked extracting the XML file and linking it with a tag
- Donald: have a mini-group meeting on this? (put something up on trac)
- Andrew will talk to Ruben and let him know we are considering options
Big Images
- CCDB has some functionality for large image viewing (everyone have a look)
- Also might look at Fiji group
Other Business
- Chris is going to fine tune nightshade more
- Donald/Chris should have their presentation ready for review on Monday and on Alfresco
- Ola: Agilo responded re: cc field. Deep problem they will have a fix next release
Action points
- Melissa: adjust version number and backport
- Ola: writes tickets/test about search issue
- Chris: test web startup on Windows at home
- Ola: fix or remove enum tab
- Everyone: Go through delete scenario (21)
- Andrew: talk to Ruben about ome-tiff options