2010-09-09 Thursday Meeting

In Attendance: Brian, Andrew, Ola, Chris, Josh, Colin, Jean-Marie, Will, Hudson-Bot

Agenda

Remember: Agenda must be complete (with estimated times) on the day before the meeting. Any additions after that must go at the bottom (AOCB)

Accepting minutes from last meeting
Matters Arising (<10 mins)
- Jean-Marie: See what's available for the analysis stuff
- Analysis Guys: Discuss upcoming conference on Thursday
- Josh: send list of topics from Murphy discussion
- Everyone move tickets to unscheduled if not part of 4.2.1
- Ola: reviews port forwarding in VM
- Chris: add ome-team trac alias
- Everyone: Look at #2836 for Pittsburg poster ideas, feedback welcome
- Andrew: Need to find out if we are portrait or landscape for the poster
- Will: Turn off web-EMDB stuff in trunk
- Everyone: Stories for Big Images
- Everyone: fill in the spreadsheet items
End of Sprint Review (20 mins)
Poster (5 mins ?)
ASCB (<5 mins)

Notes

Minutes/Matters arising
- Chris: created omero-team 'at' o.org.uk'
- BII2010 demos
  - Hard to have a one-size fits-all demo
  - Chris: Scripts from Will? FRAP
  - Cecog (#2847)
  - Demoing Object Detection (find spots)
- Murphy
  - Discussion any time before Tuesday
  - Experiment modelling - something we want to get into?
  - See: http://cvs.openmicroscopy.org.uk/snapshots/omero/editor/demoFiles/beta4/ (experiment demo XML files)
  - @Josh will send ASCB, JCB, and Editor files.
  - Please provide feedback about options here! Need to decide direction before the meet!
  - Being able to see/use the annotations is important.
  - Chris: Structured annotation with unique namespace might be the only way to go here
- VM: Ola has it set up, (looking at one hang). Web is configured.
  - Workaround for 'hang' is to quit, configure scripts by hand, and restart.
  - Needs to have some documentation done (Ola/Brian)
  - Brian will also set up and test latest version
  - Ola will do a bit of documentation for the manual process as well
- No one had time to do spreadsheet items or make tickets for big images.
Tickets
- Go into testing phase of the VM with Ola's guide
- Delete in the web? Works but not with queue.
  - Testing 'in force' Monday
  - Jean-Marie: Insight should also be set for Monday
  - Need significant permissions testing.
- Binary data delete (next phase)
  - Got delete ids in place to start querying the DB
- @Need to refactor XML Mocks so that Andrew can use it for sample OMEs.
  - Will: possible to name channels sensibly
  - Jean-Marie: you can customize it, but it's more work.
- Existing Tests on Hudson
  - Some of those tests are v. old, need to be removed
    - Should some some broken and remove next week
  - Josh: Lets move some of the tikets for this to 'unscheduled'?
    - Jean-Marie: Its a reminder we should leave them!
    - Chris: Look at them next week again. (All agree)
- End of Sprint:
  - Ola/Chris: Want to move away from mod-python for deploys
    - For testing, run on fast-CGI. Still need to fix a few things here
    - Chris will try to install locally and see if DB upgrade works
Poster
- Can be either portrait/landscape. Andrew has choosen portrait
- Josh: short list of minor changes:
  - Screenshots for data model
  - Minor fixes to text, waiting for feedback from Jason
  - Ola: Any info for demo site? (put in empty space)
  - Will: Arrows need to be bi-directional
  - Andrew: Should there be an arrow between external data & server?
    - Josh: Based on Jason's glue diagram
    - Josh: Like the 'supported formats' attached to importer
      - Like 'underlying tech' box
    - Is this representing everything OK?
      - FS in management/visualization section?
        
        Already 'busy'
        
        Cellprofiler in/out?
        
        "Importing with Bio-Formats"
      - Lots of text here!
        
        Will: Should include picture+legend for a quick read