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2010-04-20 Tuesday Meeting

Attending: Brian, Donald, Jean-Marie, Jerome Avondo, Josh, Scott, Michael, Colin, Jason, Chris, Melissa, Carlos


Remember: Agenda must be complete (with estimated times) on the day before the meeting. Any additions after that must go at the bottom (AOCB)

  1. Accepting minutes from last meeting

  2. Matters Arising (<10 mins)

    • Chris: Need to make sure Carlos can access (password ok not permissions)
    • Jean-Marie: Copy the link for the presentations to the website
    • Andrew: Make sure all your stories are in the correct milestone
    • Ola/Jean-Marie/Will: Syncronize client functionality
    • Jason: decide on presentation format for Paris
    • Andrew: OME-XML diagrams for next week at the latest
    • Chris: talk to ome-user who lost connection during import (April 7th)
    • Ola: deal with create a test share QA feedback
    • Everyone: check if your requirements in 'report 9' need to be 'unscheduled'
  3. Guest Talk: Jerome Avondo's presentation (45 mins)

  4. AOCB (<5 mins)

    • Attenuation on LightSourceSettings
    • OME-XML Status Update


  • Last Meeting minutes review

    • Approved
  • Matters Arising

    • Chris: look at shoola trac and weird milestones
    • Everyone: work on finishing up the tickets belonging to no one!
  • Jerome's Presentation

    • Bioptonics Viewer: a volume rendering app for bio images
    • working to integrate bioptonics with OMERO
    • Using GPUs for volume rendering to access high throughput
    • Most of his work is with fragment processing on the GPU
    • issues: multichannels (cf. opacticty), ROI tool differences (we need Z)
    • ...
    • using volviewer as a 3D measurement tool
    • 1 year of funding
    • gpl
    • build infrastructure: ./configure --enable-omero
  • Andrew's Questions

    • Adding attenuation on lightsource: do or don't?
    • If we stored attenutation on both lightsource settings and lightsource this solves the problem with Zeiss LSM's (although we would discourage people from using this new attenuation).
    • Add section to original_metadata.txt with [COULDNOTPARSE] (or similar)
    • OME-XML: Still need to do some things before we're done (ex: documentation).
      • Suggestion is to put out a release preview of what we have now

Action Items

  • Review XML examples; lots of small before/after examples
  • Next Tuesday: 1600 UK
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