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You are here: Home Community Minutes Conference Calls 2009 2009-11-12 Thursday Meeting

2009-11-12 Thursday Meeting

Notes

  • Admin

    • Jason at Wellcome Trust
      • "if this picks up, current funds are inadequate"
      • waiting on written response
    • ASCB
      • waiting for article
    • bioformats
      • licensing
      • ndim
        • email from Curtis
        • getting the timing write with the rest of the software community (ImageJ, ...)
        • our experiences with SPW, doing things slowly and right, and the half-way houses
        • several uses cases, real data.
        • will keep thinking about it.
        • keeping legacy API in place
  • Diagram (starting on the right)

    • roi docs
      • Chris will be making some changes
      • Donald also has some changes to make
        • Unspecified polylines/points
      • push to next week and add these guys
    • NDIM: moving forward
    • ASCB artwork:
      • rock theme, team in black kind of cool
    • 4.1 bug fixing
      • 4.1.1 release
      • nominally by end of tomorrow (mergings done)
      • Friday/Monday was spent cleaning up some RE mess from release
      • also fixes channel concurrency issues
      • insertions of HCS data has been reworked (collapsing settings, logical channels, etc.)
      • Brian merged importer changes into 4.1
      • importer changes: sending log file, setting logging, cli attachments
      • TODO: liff fixes, some minor table fixes
      • Web:
        • merging of configuration? probably
        • should not need to specify web commands
        • few bugs from the QA
      • Insight:
        • some minor UI/JXTreeTable fixes
        • projection panel? trunk only.
      • summary: overlays, hcs performance, logical channel names / colors perf, importer stuff
        • 64bit build, projection fix, ...
        • other metadata bug fixes
    • codegen / MT
      • not much progress. (work on 4.1.1 fixes)
      • need to sync the ROI changes
      • then can finish the templates and bang away
      • diagram: shrink MT, and make other boxes bigger
    • scripts
      • ~ 4 scripts are pretty much finished, demoable standalone
      • splitview script is hooked up. roi one is coming.
      • tidy them up, and move common methods in util.*
      • demo next Tuesday
    • overlay masks
      • going into the server
      • rendering engine infrastructure in place
      • binary mask arithmetic is in place
      • problems: mask speed
    • server-side rois
      • done
      • workflow is largely the same
      • if you had an XML saved, then you save to server and never touch the file again
      • patch/flag to remove the connection tool (RoiRoiLinks)
      • should display any ROIs on the server.
      • model change: text to all shapes
      • db change: point size of polygons, polylines were 255 characters.
      • on-the-fly update.
      • testing next week? latter part of next week.
        • testing performance, workflow, etc...
    • QA / web
      • move QA to next week
      • do a review of UI and testing
      • fixing bugs tomorrow
      • future of web...
      • focus on QA for now? do we need to discuss?
        • webclient * update of client UI * have a short meeting to give suggestions * do everything that insight does, etc. * all have conflicting arguments. have to make a decision
    • perms
      • "guarantee graph groups" was begun. good progress. needs to keep going.
      • evaluate next week if still want to try to integrate into the clients
    • cellprofiler
      • add to the graffle
      • should specify the version we support
      • need to communicate on things
      • undocumented struct, a patch broke things
      • our model has changed as well
      • pytable writer gets pushed
      • donald away on the 27th (10 working days left)
    • dropbox
      • few bugs
      • shutdown fix seems to work
      • behavior depending on number and size of files
      • passing off directory to creation to sysadmin
      • bug fixing for next week
      • possible to get it into 4.1.1?
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