2007-09-20 Project-wide 3:45 BST
Attending:
Agenda
- Data Model: changes, updates and versions
- http://openmicroscopy.org Updates
- Bio-Formats: status update
- OME-TIFF: status update
- OME 2.6.1: Status update
- OMERO: status update
- server
- importer
- insight
- webadmin
- Review of who is doing what
- Other
Notes
- Data model versions and minor changes
- Major versions vs. Minor versions (discussions are a bit confused as to what these mean)
- Major version is a schema namespace change
- Minor version is a change in the schema element incrementation
- Change "minor version" of OME-XML 2004 from "FC" to "FC+TIFF" or "FC-TIFF" (documenting TIFF change)
- Change "minor version" of OME-XML 2007 from "1" to "2" (documenting regex change, etc.)
- Tickets for minor changes to OME-XML 2007 (Trac Milestone — Interim Schema Release)
- Fix documentation on "Description" block (Ticket #7)
- Andrew to update OME-XML 2004 schema with new "Description" documentation and "minor version"
- ManufactedSpec and FilterSpec
- Making serial number optional? To **ome-nitpick** (Andrew).
- Making lot number optional? To **ome-nitpick** (Andrew).
- Combining ManufacturedSpec to with FilterSpec and choose (SerialNo vs. LotNo)? Yes, in the future.
- Strict vs. Lite in the future and optional/strict tags possible. Speak in Two Weeks about this.
- Homework assignment: Banners of shininess suggestions.
- http://openmicroscopy.org Updates
- Tabled till two weeks from now.
- Bio-Formats
- Usual bug fixes
- Indexed color (intensity vs. pseudo-color maps)
- Compressed DICOM
- ColorExpander (wait for input from Brian)
- OME-TIFF
- Andor support for OME-XML and OME-TIFF
- Curtis to get templates to Chris for Java mappings
- OME 2.6.1
- Ilya: It's ready to roll!
- Testing LDAP? Chris and Ilya to test Monday on LifeSci LDAP.
- DGAS — http://ome.grc.nia.nih.gov/index-yoshikawa.html
- Talking points re: tables and experiment definitions in DGAS
- STs for DGAS — http://cvs.openmicroscopy.org.uk/horde/chora/browse.php?f=OME%2Fcustom%2FDGAS-Annotations%2F Link now broken
- Ilya to put up 2.6.1 tarball on Necromancer; Chris to update HTML and put tarball in the right place.
- OMERO Server
- New I/O functionality in
- Jean-Marie and Aleksandra's code for settings propagation
- Thumbnail synchronization fixes to be looked at
- New rendering engine updates for out-of-range issues
- OMERO Insight
- Synchronization with server side changes and new rendering engine
- OMERO Importer
- Bulk metadata for image formats that are not metadata rich
- New formats from Melissa that have been validated
- OMERO WebAdmin
- Nothing to report
- Other
- Ilya: To attach a TAG to OME_2_6_0 for OME_2_6_1_FINAL.