2005-11-17 Boston, Dundee

Attending:

Agenda

Review last week's action points
Decisions/Issues
Week-in-review
- Bugs (josh)
- Eclipse, everyone? (josh)
- Documentation, everyone?
Week-to-come
- Importer (Chris, Brian)
  - Non-contiguous images (ex. where wavelength one has z-sections and wavelength two does not)
  - Client-server observer pattern and Ice server-client invocation
  - Configuration option storage and/or import (database and/or XML files)
  - Event hierarchies (how to delete/query all images from one import or just all metadata from one image)
And as always, WhoNeedsWhatFromWhomByWhen

Review old ActionPoints
- Carried over a couple here (Josh: UTF / Timestamp; Jason ?? )
Jean-Marie
- What to do with Wiki (not uptodate)
- Tests
- OME-SRV-TESTS vs. Hibernate
Brian
- gone through tiki
- what's proposal; what's out-of-date
- still open issue (lot of information for first week)
Tony
- cleaning up tiki's a good thing
- talk by Ann Carpenter (CellProfiler)
- John Alback (sp?) (Sorger lab) — tracking with imagej (<--> ome)
- want to call Zach (use cases for OME); talk on monday
Josh
- annotations and config (see bugs 607,609)
Chris
- design of importer
- going through file formats (and new ones)
- Issues
  - non-contiguous images (change data model?)(raw 5D format?) for Jason
  - client-server observer.
    - validation of grouping/transformations (feedback)
    - cancel
    - request of information from client by server
  - config
    - max files, etc.
    - changeable. but not runtime.
    - plugin specific.
  - tracking:
    - mex for whole import
    - mex for single image (determining what to delete on rollback)
Tests
- base-line database on test database. (DBUNIT? -j.m)
- don't get too far away from server tests.
- (jm — look into PojoTxTest)

Jason/Jean-Marie decide what to do with Shoola code based on OME-JAVA (data models, wiki documentation)
Everyone: OldDocumentation page — Restructuring Tiki (Percent complete. Status. {Proposal, Draft, Etc.} — TIKI Manager?)
Josh codeStyle in subversion links from code management DONE
Chris/Brian — multiple pages of documentation (disclosable?)
Josh/Chris/Brian - 800 GMT talk on observer pattern (basic state diagram; where communication needs to happen) DONE