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You are here: Home Community Minutes Meetings June 2012 Paris User's Meeting 2012 OME User's Meeting - Programme

2012 OME User's Meeting - Programme

A programme of talks on day 1, followed by workshops on day 2.

Day 1 — Monday 18th June, 2012

08:30 - 09:00 Registration & Coffee
09:00 - 09:10 Welcome & Introduction Spencer Shorte, Institut Pasteur &
Jason Swedlow, OME Dundee
09:10 - 09:35 OME in Dundee Emma Hill, Dundee
09:35 - 10:00 OMERO: Down Under Kim Linton, Monash University
10:00 - 10:25 Inspiring application of OMERO – a case study Steve Rawsthorne, John Innes Centre
10:25 - 10:50 Columbus for HCS and Secondary Analysis Martin Daffertshofer, PerkinElmer
10:50 - 11:20 Coffee
11:20 - 11:45 The JCB DataViewer: Bringing New
Dimensions to Published Image Data
Liz Williams, JCB
11:45 - 12:10 ImageJ2 – ImageJ for the Next
Generation of Biological Image Data
Kevin Eliceiri, Univ Wisconsin-Madison
12:10 - 12:35 Using OMERO for yeast high throughput
microscopy: from images to networks
Anatole Chessel, Gurdon Institute,
Univ of Cambridge
12:35 - 12:45 Group Picture Time
12:45 - 14:00 Lunch
14:00 - 14:15 Satellite Overview Jason Swedlow, OME Dundee
14:15 - 14:40 What Can Woolz Bring To OME? Bill Hill, MRC-HGU
14:40 - 15:05 CellOrganizer, PatternUnmixer and OMERO Bob Murphy, Carnegie Mellon University
15:05 - 15:30 Icy–An Open-Source Community Image Processing Software Jean-Christophe Olivo-Marin, Institut Pasteur
15:30 - 16:00 Coffee
16:00 - 17:30 Josh’s Annual Polling Priorities and Wishes Josh Moore, OME & Glencoe Software
17:30 - 19:30 Poster Session with Wine & Nibbles

Day 2 — Tuesday 19th June, 2012

08:30 - 09:00 Coffee
09:00 - 09:15 Introduction
09:15 - 10:45 Workshop I

* Implementing OMERO
* Integrating with Insight
* Extending OMERO.web
* Integrating Bio-Formats
* OMERO Usability & User feedback
10:45 - 11:15 Coffee
11:15 - 12:45 Workshop II

* Integrating with Insight
* Integrating Bio-Formats
* Writing scripts
* OMERO Usability & User feedback
12:45 - 14:00 Lunch
14:00 - 15:30 Workshop III

* Extending OMERO.web
* Integrating Bio-Formats
* Integrating OME and ImageJ into KNIME for high-throughput image analysis
* OMERO Usability & User feedback
15:30 - 16:00 Coffee
16:00 - 17:00 Feedback & Wrap-Up


Please email us before the meeting if there is another workshop that you would like us to run.
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